Index A | B | C | D | E | F | G | H | I | L | M | N | P | R | S | T | W A adjust_model() (in module bibcat.llm.io) analyze_missions() (in module bibcat.llm.stats) append_human_labels_with_mapped_papertype() (in module bibcat.llm.metrics) append_llm_labels_with_mapped_papertype() (in module bibcat.llm.metrics) audit_summary() (in module bibcat.llm.stats) B bibcat module bibcat.core module bibcat.core.config module bibcat.data module bibcat.data.build_dataset module bibcat.llm module bibcat.llm.io module bibcat.llm.metrics module bibcat.llm.plots module bibcat.llm.stats module bibcat.utils module bibcat.utils.logger_config module bibcat.utils.utils module build_dataset() (in module bibcat.data.build_dataset) C check_env() (in module bibcat) collect_confusion_matrix_cell_entries() (in module bibcat.llm.metrics) combine_datasets() (in module bibcat.data.build_dataset) compute_and_save_metrics() (in module bibcat.llm.metrics) confusion_matrix_plot() (in module bibcat.llm.plots) convert_sets() (in module bibcat.utils.utils) D ddict (class in bibcat.core.config) default() (bibcat.utils.utils.NumpyEncoder method) E extract_eval_data() (in module bibcat.llm.metrics) extract_labels() (in module bibcat.llm.metrics) extract_papertext_info() (in module bibcat.data.build_dataset) extract_papertrack_info() (in module bibcat.data.build_dataset) extract_roc_data() (in module bibcat.llm.metrics) F file_exists() (in module bibcat.data.build_dataset) G get_config() (in module bibcat.core.config) get_custom_config() (in module bibcat.core.config) get_default_config() (in module bibcat.core.config) get_file() (in module bibcat.llm.io) get_llm_prompt() (in module bibcat.llm.io) get_roc_metrics() (in module bibcat.llm.metrics) get_source() (in module bibcat.llm.io) group_by_agg() (in module bibcat.llm.stats) H human_labels_when_no_llm_output() (in module bibcat.llm.metrics) I inconsistent_classifications() (in module bibcat.llm.stats) L load_datasets() (in module bibcat.data.build_dataset) load_json_file() (in module bibcat.utils.utils) load_source_dataset() (in module bibcat.data.build_dataset) M map_papertype() (in module bibcat.llm.metrics) missing_bibcodes_in_papertext() (in module bibcat.data.build_dataset) module bibcat bibcat.core bibcat.core.config bibcat.data bibcat.data.build_dataset bibcat.llm bibcat.llm.io bibcat.llm.metrics bibcat.llm.plots bibcat.llm.stats bibcat.utils bibcat.utils.logger_config bibcat.utils.utils N NumpyEncoder (class in bibcat.utils.utils) P prepare_roc_inputs() (in module bibcat.llm.metrics) R read_output() (in module bibcat.llm.io) read_yaml() (in module bibcat.core.config) roc_plot() (in module bibcat.llm.plots) S save_evaluation_stats() (in module bibcat.llm.stats) save_json_file() (in module bibcat.utils.utils) save_operation_stats() (in module bibcat.llm.stats) save_text_file() (in module bibcat.data.build_dataset) save_text_files() (in module bibcat.data.build_dataset) setup_logger() (in module bibcat.utils.logger_config) setup_paths() (in module bibcat) T trim_dict() (in module bibcat.data.build_dataset) tuple_constructor() (in module bibcat.core.config) W write_output() (in module bibcat.llm.io) write_stats() (in module bibcat.llm.stats) write_summary() (in module bibcat.llm.io)